Ribosomal protein S6

Protein-coding gene in the species Homo sapiens
RPS6
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5A2Q, 5AJ0, 4D5L, 4UJE, 5FLX, 4UJC, 3J7P, 4KZZ, 4UJD, 4KZY, 4D61, 3J7R, 4KZX

Identifiers
AliasesRPS6, S6, ribosomal protein S6
External IDsOMIM: 180460; MGI: 98159; HomoloGene: 85949; GeneCards: RPS6; OMA:RPS6 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for RPS6
Genomic location for RPS6
Band9p22.1Start19,375,715 bp[1]
End19,380,236 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for RPS6
Genomic location for RPS6
Band4|4 C4Start86,772,897 bp[2]
End86,775,649 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • lactiferous duct

  • pylorus

  • pancreatic ductal cell

  • vulva

  • germinal epithelium

  • caput epididymis

  • ganglionic eminence

  • skin of abdomen

  • cardia

  • urethra
Top expressed in
  • uterus

  • thymus

  • ovary

  • lens

  • urinary bladder

  • spleen

  • pancreas

  • ganglionic eminence

  • islet of Langerhans

  • lung
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • structural constituent of ribosome
  • protein binding
  • protein kinase binding
  • RNA binding
Cellular component
  • cell body
  • cytosol
  • ribosome
  • membrane
  • intracellular anatomical structure
  • nucleolus
  • small ribosomal subunit
  • cytoplasmic ribonucleoprotein granule
  • nucleus
  • nucleoplasm
  • cytoplasm
  • polysome
  • cytosolic small ribosomal subunit
  • dendrite
  • perinuclear region of cytoplasm
  • endoplasmic reticulum
  • ribonucleoprotein complex
Biological process
  • viral transcription
  • SRP-dependent cotranslational protein targeting to membrane
  • TOR signaling
  • positive regulation of apoptotic process
  • translational initiation
  • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • protein biosynthesis
  • G1 phase
  • mitotic cell cycle
  • placenta development
  • T cell proliferation involved in immune response
  • rRNA processing
  • activation-induced cell death of T cells
  • mitotic cell cycle checkpoint signaling
  • gastrulation
  • mammalian oogenesis stage
  • T cell differentiation in thymus
  • ribosomal small subunit biogenesis
  • glucose homeostasis
  • negative regulation of apoptotic process
  • erythrocyte development
  • G1/S transition of mitotic cell cycle
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6194

20104

Ensembl

ENSG00000137154

ENSMUSG00000028495

UniProt

P62753

P62754

RefSeq (mRNA)

NM_001010

NM_009096

RefSeq (protein)

NP_001001

NP_033122

Location (UCSC)Chr 9: 19.38 – 19.38 MbChr 4: 86.77 – 86.78 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ribosomal protein S6 (rpS6 or eS6) is a component of the 40S ribosomal subunit and is therefore involved in translation. Mouse model studies have shown that phosphorylation of eS6 is involved in the regulation of cell size, cell proliferation, and glucose homeostasis.[5][6][7]

Studies show that the p70 ribosomal protein S6 kinases (S6K1 and S6K2) and p90 ribosomal protein S6 kinases (RSK) both phosphorylate eS6 and that S6K1 and S6K2 predominate this function.

Pathways leading to the induction of human eS6 phosphorylation have been found to enhance IL-8 protein synthesis. This mechanism is dependent on A/U-rich proximal sequences (APS) found in the 3'UTR of IL-8 immediately after the stop codon.[8]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000137154 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028495 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ruvinsky I, Sharon N, Lerer T, Cohen H, Stolovich-Rain M, Nir T, et al. (September 2005). "Ribosomal protein S6 phosphorylation is a determinant of cell size and glucose homeostasis". Genes & Development. 19 (18): 2199–211. doi:10.1101/gad.351605. PMC 1221890. PMID 16166381.
  6. ^ Ruvinsky I, Meyuhas O (June 2006). "Ribosomal protein S6 phosphorylation: from protein synthesis to cell size". Trends in Biochemical Sciences. 31 (6): 342–8. doi:10.1016/j.tibs.2006.04.003. PMID 16679021.
  7. ^ Ruvinsky I, Katz M, Dreazen A, Gielchinsky Y, Saada A, Freedman N, et al. (May 2009). "Mice deficient in ribosomal protein S6 phosphorylation suffer from muscle weakness that reflects a growth defect and energy deficit". PLOS ONE. 4 (5): e5618. Bibcode:2009PLoSO...4.5618R. doi:10.1371/journal.pone.0005618. PMC 2682700. PMID 19479038.
  8. ^ Ang Z, Abdi Gunawan Koen R, Er JZ, Lee LT, Tam Kit Chung J, Guo H, Ding JL (2019). "Novel AU-rich proximal UTR sequences (APS) enhance CXCL8 synthesis upon the induction of rpS6 phosphorylation". PLOS Genet. 15 (4): e1008077. doi:10.1371/journal.pgen.1008077. PMC 6476525. PMID 30969964.

External links

  • Ribosomal+Protein+S6 at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
  • Overview of all the structural information available in the PDB for UniProt: P62753 (Human 40S ribosomal protein S6) at the PDBe-KB.
  • v
  • t
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Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
  • aIF1
  • aIF2
  • aIF5
  • aIF6
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/​Mitochondrial
Archaeal/​Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts