40S ribosomal protein S24

Protein-coding gene in the species Homo sapiens
RPS24
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5A2Q, 5AJ0, 5FLX, 4D61, 4D5L, 4UJD, 4UJE, 4UJC

Identifiers
AliasesRPS24, DBA3, S24, ribosomal protein S24, eS24
External IDsOMIM: 602412 MGI: 98147 HomoloGene: 68148 GeneCards: RPS24
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for RPS24
Genomic location for RPS24
Band10q22.3Start78,033,760 bp[1]
End78,056,813 bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for RPS24
Genomic location for RPS24
Band14|14 A3Start24,537,193 bp[2]
End24,547,027 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • caput epididymis

  • lactiferous duct

  • urethra

  • corpus epididymis

  • trabecular bone

  • superficial temporal artery

  • lower lobe of lung

  • vena cava

  • pylorus
Top expressed in
  • yolk sac

  • lip

  • superior frontal gyrus

  • morula

  • spermatid

  • spermatocyte

  • medullary collecting duct

  • proximal tubule

  • thymus

  • neural tube
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • structural constituent of ribosome
  • translation initiation factor binding
  • RNA binding
Cellular component
  • cytosol
  • ribosome
  • membrane
  • intracellular anatomical structure
  • small ribosomal subunit
  • nucleus
  • nucleoplasm
  • cytosolic small ribosomal subunit
Biological process
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • viral transcription
  • SRP-dependent cotranslational protein targeting to membrane
  • erythrocyte homeostasis
  • translational initiation
  • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • ribosomal small subunit biogenesis
  • protein biosynthesis
  • rRNA processing
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6229

20088

Ensembl

ENSG00000138326

ENSMUSG00000025290

UniProt

P62847

P62849

RefSeq (mRNA)
NM_001026
NM_001142282
NM_001142283
NM_001142284
NM_001142285

NM_033022

NM_011297
NM_207634
NM_207635
NM_001360584
NM_001360585

NM_001360586

RefSeq (protein)
NP_001017
NP_001135754
NP_001135755
NP_001135756
NP_001135757

NP_148982

NP_035427
NP_997517
NP_997518
NP_001347513
NP_001347514

NP_001347515

Location (UCSC)Chr 10: 78.03 – 78.06 MbChr 14: 24.54 – 24.55 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

40S ribosomal protein S24 is a protein that in humans is encoded by the RPS24 gene.[5][6][7]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S24E family of ribosomal proteins. It is located in the cytoplasm. Alternative splice variants that encode different protein isoforms exist. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000138326 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025290 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Jones AM, Marzella R, Rocchi M, Hewitt JE (Mar 1997). "Mapping of the human ribosomal small subunit protein gene RPS24 to the chromosome 10q22-q23 boundary". Genomics. 39 (1): 121–2. doi:10.1006/geno.1996.4442. PMID 9027498.
  6. ^ Kenmochi N, Kawaguchi T, Rozen S, Davis E, Goodman N, Hudson TJ, Tanaka T, Page DC (Aug 1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi:10.1101/gr.8.5.509. PMID 9582194.
  7. ^ a b "Entrez Gene: RPS24 ribosomal protein S24".

Further reading

  • Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID 8722009.
  • Huang RT, Li DR, Wei J, et al. (1992). "Isolation and identification of hepatitis E virus in Xinjiang, China". J. Gen. Virol. 73 (5): 1143–8. doi:10.1099/0022-1317-73-5-1143. PMID 1588318.
  • Brown SJ, Jewell A, Maki CG, Roufa DJ (1990). "A cDNA encoding human ribosomal protein S24". Gene. 91 (2): 293–6. doi:10.1016/0378-1119(90)90103-X. PMID 2210388.
  • Xu WB, Roufa DJ (1996). "The gene encoding human ribosomal protein S24 and tissue-specific expression of differentially spliced mRNAs". Gene. 169 (2): 257–62. doi:10.1016/0378-1119(96)88652-5. PMID 8647458.
  • Vladimirov SN, Ivanov AV, Karpova GG, et al. (1996). "Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry". Eur. J. Biochem. 239 (1): 144–9. doi:10.1111/j.1432-1033.1996.0144u.x. PMID 8706699.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Yu Y, Ji H, Doudna JA, Leary JA (2005). "Mass spectrometric analysis of the human 40S ribosomal subunit: Native and HCV IRES-bound complexes". Protein Sci. 14 (6): 1438–46. doi:10.1110/ps.041293005. PMC 2253395. PMID 15883184.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


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Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
  • aIF1
  • aIF2
  • aIF5
  • aIF6
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/​Mitochondrial
Archaeal/​Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
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