MTHFD1

MTHFD1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1A4I, 1DIA, 1DIB, 1DIG

Identifiers
AliasesMTHFD1, MTHFC, MTHFD, C1-THF-Synthase, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, CIMAH
External IDsOMIM: 172460 MGI: 1342005 HomoloGene: 55940 GeneCards: MTHFD1
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[1]
Chromosome 12 (mouse)
Genomic location for MTHFD1
Genomic location for MTHFD1
Band12|12 C3Start76,302,072 bp[1]
End76,366,577 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of liver

  • gastrocnemius muscle

  • Achilles tendon

  • adipose tissue

  • ganglionic eminence

  • subcutaneous adipose tissue

  • caudate nucleus

  • nucleus accumbens

  • right coronary artery

  • kidney
Top expressed in
  • Paneth cell

  • primitive streak

  • right lobe of liver

  • left lobe of liver

  • kidney

  • left lung

  • right lung lobe

  • yolk sac

  • ureter

  • medullary collecting duct
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • nucleotide binding
  • methylenetetrahydrofolate dehydrogenase (NADP+) activity
  • methylenetetrahydrofolate dehydrogenase (NAD+) activity
  • ligase activity
  • methylenetetrahydrofolate dehydrogenase [NAD(P)+ activity]
  • catalytic activity
  • oxidoreductase activity
  • ATP binding
  • hydrolase activity
  • protein binding
  • formate-tetrahydrofolate ligase activity
  • methenyltetrahydrofolate cyclohydrolase activity
Cellular component
  • membrane
  • mitochondrion
  • extracellular exosome
  • cytoplasm
  • cytosol
Biological process
  • purine nucleotide biosynthetic process
  • transsulfuration
  • neutrophil homeostasis
  • one-carbon metabolic process
  • serine family amino acid metabolic process
  • embryonic neurocranium morphogenesis
  • tetrahydrofolate interconversion
  • histidine biosynthetic process
  • cellular amino acid biosynthetic process
  • somite development
  • serine family amino acid biosynthetic process
  • methionine biosynthetic process
  • heart development
  • methionine metabolic process
  • neural tube closure
  • folic acid metabolic process
  • embryonic viscerocranium morphogenesis
  • metabolism
  • purine nucleobase biosynthetic process
  • 10-formyltetrahydrofolate biosynthetic process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4522

108156

Ensembl

n/a

ENSMUSG00000021048

UniProt

P11586

Q922D8

RefSeq (mRNA)

NM_005956
NM_001364837

NM_138745

RefSeq (protein)

NP_005947
NP_001351766

NP_620084

Location (UCSC)n/aChr 12: 76.3 – 76.37 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 (MTHFD1) is a gene located in humans on chromosome 14[4] that encodes a protein, C-1-tetrahydrofolate synthase, cytoplasmic also known as C1-THF synthase, with three distinct enzymatic activities.[5][6][7]

Function

This gene encodes a protein that possesses three distinct enzymatic activities, methylenetetrahydrofolate dehydrogenase (1.5.1.5), methenyltetrahydrofolate cyclohydrolase (3.5.4.9) and formate–tetrahydrofolate ligase (6.3.4.3). Each of these activities catalyzes one of three sequential reactions in the interconversion of 1-carbon derivatives of tetrahydrofolate, which are substrates for methionine, thymidylate, and de novo purine syntheses. The trifunctional enzymatic activities are conferred by two major domains, an aminoterminal portion containing the dehydrogenase and cyclohydrolase activities and a larger synthetase domain.[7][8]

Clinical significance

Mutations of the MTHFD1 gene may cause methylenetetrahydrofolate dehydrogenase 1 deficiency, also known as combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH).[8]

References

  1. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000021048 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Symbol report for MTHFD1". HUGO. HUGO Gene Nomenclature Committee. Retrieved 13 March 2024.
  5. ^ Hum DW, Bell AW, Rozen R, MacKenzie RE (November 1988). "Primary structure of a human trifunctional enzyme. Isolation of a cDNA encoding methylenetetrahydrofolate dehydrogenase-methenyltetrahydrofolate cyclohydrolase-formyltetrahydrofolate synthetase". The Journal of Biological Chemistry. 263 (31): 15946–15950. doi:10.1016/S0021-9258(18)37540-9. PMID 3053686.
  6. ^ Rozen R, Barton D, Du J, Hum DW, MacKenzie RE, Francke U (June 1989). "Chromosomal localization of the gene for the human trifunctional enzyme, methylenetetrahydrofolate dehydrogenase-methenyltetrahydrofolate cyclohydrolase-formyltetrahydrofolate synthetase". American Journal of Human Genetics. 44 (6): 781–786. PMC 1715669. PMID 2786332.
  7. ^ a b "Entrez Gene: MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase".
  8. ^ a b Watkins D, Schwartzentruber JA, Ganesh J, Orange JS, Kaplan BS, Nunez LD, et al. (September 2011). "Novel inborn error of folate metabolism: identification by exome capture and sequencing of mutations in the MTHFD1 gene in a single proband". Journal of Medical Genetics. 48 (9): 590–592. doi:10.1136/jmedgenet-2011-100286. PMID 21813566. S2CID 9623450.

Further reading

  • Schild D, Brake AJ, Kiefer MC, Young D, Barr PJ (April 1990). "Cloning of three human multifunctional de novo purine biosynthetic genes by functional complementation of yeast mutations". Proceedings of the National Academy of Sciences of the United States of America. 87 (8): 2916–2920. Bibcode:1990PNAS...87.2916S. doi:10.1073/pnas.87.8.2916. PMC 53804. PMID 2183217.
  • Peri KG, Belanger C, Mackenzie RE (November 1989). "Nucleotide sequence of the human NAD-dependent methylene tetrahydrofolate dehydrogenase-cyclohydrolase". Nucleic Acids Research. 17 (21): 8853. doi:10.1093/nar/17.21.8853. PMC 335047. PMID 2587219.
  • MacKenzie RE, Mejia N, Yang XM (1989). "Methylenetetrahydrofolate dehydrogenases in normal and transformed mammalian cells". Advances in Enzyme Regulation. 27: 31–39. doi:10.1016/0065-2571(88)90007-6. PMID 3074630.
  • Shannon KW, Rabinowitz JC (September 1986). "Purification and characterization of a mitochondrial isozyme of C1-tetrahydrofolate synthase from Saccharomyces cerevisiae". The Journal of Biological Chemistry. 261 (26): 12266–12271. doi:10.1016/S0021-9258(18)67234-5. PMID 3528153.
  • Mejia NR, MacKenzie RE (November 1985). "NAD-dependent methylenetetrahydrofolate dehydrogenase is expressed by immortal cells". The Journal of Biological Chemistry. 260 (27): 14616–14620. doi:10.1016/S0021-9258(17)38612-X. PMID 3877056.
  • Allaire M, Li Y, MacKenzie RE, Cygler M (February 1998). "The 3-D structure of a folate-dependent dehydrogenase/cyclohydrolase bifunctional enzyme at 1.5 A resolution". Structure. 6 (2): 173–182. doi:10.1016/S0969-2126(98)00019-7. PMID 9519408.
  • Hol FA, van der Put NM, Geurds MP, Heil SG, Trijbels FJ, Hamel BC, et al. (February 1998). "Molecular genetic analysis of the gene encoding the trifunctional enzyme MTHFD (methylenetetrahydrofolate-dehydrogenase, methenyltetrahydrofolate-cyclohydrolase, formyltetrahydrofolate synthetase) in patients with neural tube defects". Clinical Genetics. 53 (2): 119–125. doi:10.1111/j.1399-0004.1998.tb02658.x. PMID 9611072. S2CID 42398289.
  • Schmidt A, Wu H, MacKenzie RE, Chen VJ, Bewly JR, Ray JE, et al. (May 2000). "Structures of three inhibitor complexes provide insight into the reaction mechanism of the human methylenetetrahydrofolate dehydrogenase/cyclohydrolase". Biochemistry. 39 (21): 6325–6335. doi:10.1021/bi992734y. PMID 10828945.
  • Brody LC, Conley M, Cox C, Kirke PN, McKeever MP, Mills JL, et al. (November 2002). "A polymorphism, R653Q, in the trifunctional enzyme methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase/formyltetrahydrofolate synthetase is a maternal genetic risk factor for neural tube defects: report of the Birth Defects Research Group". American Journal of Human Genetics. 71 (5): 1207–1215. doi:10.1086/344213. PMC 385099. PMID 12384833.
  • Gevaert K, Goethals M, Martens L, Van Damme J, Staes A, Thomas GR, Vandekerckhove J (May 2003). "Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides". Nature Biotechnology. 21 (5): 566–569. doi:10.1038/nbt810. PMID 12665801. S2CID 23783563.
  • Parle-McDermott A, Mills JL, Kirke PN, Cox C, Signore CC, Kirke S, et al. (February 2005). "MTHFD1 R653Q polymorphism is a maternal genetic risk factor for severe abruptio placentae". American Journal of Medical Genetics. Part A. 132A (4): 365–368. doi:10.1002/ajmg.a.30354. PMID 15633187. S2CID 26023725.
  • Parle-McDermott A, Pangilinan F, Mills JL, Signore CC, Molloy AM, Cotter A, et al. (July 2005). "A polymorphism in the MTHFD1 gene increases a mother's risk of having an unexplained second trimester pregnancy loss". Molecular Human Reproduction. 11 (7): 477–480. doi:10.1093/molehr/gah204. PMID 16123074.
  • Kohlmeier M, da Costa KA, Fischer LM, Zeisel SH (November 2005). "Genetic variation of folate-mediated one-carbon transfer pathway predicts susceptibility to choline deficiency in humans". Proceedings of the National Academy of Sciences of the United States of America. 102 (44): 16025–16030. Bibcode:2005PNAS..10216025K. doi:10.1073/pnas.0504285102. PMC 1276051. PMID 16236726.
  • De Marco P, Merello E, Calevo MG, Mascelli S, Raso A, Cama A, Capra V (2006). "Evaluation of a methylenetetrahydrofolate-dehydrogenase 1958G>A polymorphism for neural tube defect risk". Journal of Human Genetics. 51 (2): 98–103. doi:10.1007/s10038-005-0329-6. PMID 16315005.
  • Sun J, Xu Y, Zhu Y, Lu H (October 2006). "Methylenetetrahydrofolate reductase gene polymorphism, homocysteine and risk of macroangiopathy in Type 2 diabetes mellitus". Journal of Endocrinological Investigation. 29 (9): 814–820. doi:10.1007/bf03347376. PMID 17114913. S2CID 38072740.
  • Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, et al. (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Molecular Systems Biology. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.

External links

  • Overview of all the structural information available in the PDB for UniProt: P11586 (C-1-tetrahydrofolate synthase, cytoplasmic) at the PDBe-KB.
  • v
  • t
  • e
  • 1a4i: HUMAN TETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE
    1a4i: HUMAN TETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE
  • 1dia: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY249543
    1dia: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY249543
  • 1dib: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY345899
    1dib: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY345899
  • 1dig: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY374571
    1dig: HUMAN METHYLENETETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE COMPLEXED WITH NADP AND INHIBITOR LY374571
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